selected publications
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academic article
- Sequence diversity locus structure, and evolutionary history of the SpTransformer genes in the sea urchin genome. Frontiers in Immunology. 2021
- Guardian of the genome: an alternative RAG/Transib co-evolution hypothesis for the origin of V(D)J recombination. Frontiers in Immunology. 2021
- Individual sea urchin coelomocytes undergo somatic immune gene diversification. Frontiers in Immunology. 2019
- Coelomocytes proliferate in the axial organ and pharynx of the purple sea urchin. Frontiers in Immunology. 2019
- The SpTransformer proteins from the California purple sea urchin opsonize bacteria, augment phagocytosis, and retard bacterial growth. PLoS ONE. 2018
- The SpTransformer gene family (formerly Sp185/333) in the purple sea urchin and the functional diversity of the anti-pathogen rSpTransformer-E1 protein. Frontiers in Immunology. 2017
- SpTransformer, a recombinant Sp185/333 protein, binds to phosphatidic acid and deforms membranes. Frontiers in Immunology. 2017
- Multitasking immune Sp185/333 protein, rSpTransformer-E1, and its recombinant fragments undergo secondary structural transformation upon binding targets. Journal of Immunology. 2017
- A recombinant Sp185/333 protein from the purple sea urchin has multitasking binding activities towards certain microbes and PAMPs. Immunobiology. 2016
- Genomic instability and shared mechanisms for gene diversification in two distant immune gene families: the plant NBS-LRR genes and the echinoid 185/333 genes. In “The Evolution of the Immune System, Conservation and Diversification” (D Malagoli, ed.). Elsevier Inc. Academic Press, London. 2016
- Short tandem repeats, duplications, deletions, and genomic instability in a rapidly diversified immune gene family. BMC Genomics. 2016
- Tuning the host-pathogen relationship through evolution with a special focus on the echinoid Sp185/333 system. Invertebrate Survival Journal. 2016
- Extraordinary diversity of immune response proteins among sea urchins: nickel-isolated Sp185/333 proteins show broad variations in size and charge. PLoS ONE. 2015
- Single sea urchin phagocytes express messages of a single sequence from the diverse Sp185/333 gene family in response to bacterial challenge. Journal of Immunology. 2014
- Aggregation of sea urchin phagocytes is augmented in vitro by lipopolysaccharide. PLoS ONE. 2013
- The Sp185/333 immune response genes and proteins are expressed in all major organs of the adult purple sea urchin. Innate Immunity. 2013
- Shotgun proteomics of coelomocytes from the purple sea urchin, Strongylocentrotus purpuratus. Developmental and Comparative Immunology. 2013
- An Sp185/333 gene cluster from the purple sea urchin and putative microsatellite-mediated gene diversification. BMC Genomics. 2010
- Sp185/333: A novel family of genes and proteins involved in the purple sea urchin immune response. Developmental and Comparative Immunology. 2010
- SpTie1/2 from the sea urchin Strongylocentrotus purpuratus, is an orthologue of vertebrate Tie1 and Tie2 and is expressed in coelomocytes, axial organ and embryos. Developmental and Comparative Immunology. 2010
- Two recombinant peptides, SpStrongylocins 1 and 2, from Strongylocentrotus purpuratus, show antimicrobial activity against Gram-positive and Gram-negative bacteria. Developmental and Comparative Immunology. 2010
- A method for identifying alternative or cryptic splice sites within gene and mRNA sequences. BMC Genomics. 2009
- Highly variable immune response proteins (185/333) from the sea urchin Strongylocentrotus purpuratus: proteomic analyses identifies diversity within and between individuals. Journal of Immunology. 2009
- Sequence variations in 185/333 messages from the purple sea urchin suggest post-transcriptional modifications to increase immune diversity. Journal of Immunology. 2008
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article
- Multi-tasking proteins protect sea urchins from multitudes of pathogens. Atlas of Science (http://atlasofscience.org/multi-tasking-proteins-protect-sea-urchins-from-multitudes-of-pathogens/#more-15000). 2016
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chapter
- Methods for collection, handling, and analysis of sea urchin coelomocytes. Methods in Cell Biology , Vol 150, Part A, Chapter 16. 2019
- Echinodermata: The Complex Immune System in Echinoderms. Advances in Comparative Immunology. 2018
- Genomic instability and shared mechanisms for gene diversification in two distant immune gene families: the echinoid 185/333 and the plant NBS-LRR. The Evolution of the Immune System; Conservation and Diversification. 2015
- Echinoderm Immunity. Invertebrate Immunity. 2010
- Host responses to bacteria; innate immunity in invertebrates. The Influence of Cooperative Bacteria on Animal Host Biology. 2005
- The complement system in sea urchins. Phylogenetic Perspectives on the Vertebrate Immune Systems. 2001
- The role of mesohyl cells in sponge allograft rejection. Invertebrate Historecognition. 1998
- The echinoderm immune system: characters shared with vertebrate immune systems, and characters arising later in deuterostome phylogeny. Primordial Immunity: Foundations for the Vertebrate Immune System. 1994
- Cellular morphology of Callyspongia diffusa (Porifera: Demospongia). New Perspectives in Sponge Biology. 1990
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conference paper
- Progression and recovery of bald sea urchin disease in Strongylocentrotus purpuratus 2020
- The immune response in the sea urchin, Strongylocentrotus purpuratus, has dynamic changes in immune cell populations 2019
- Innate immunity in the purple sea urchin and diversity of the Sp185/333 system 2015
- Coelomocytes and the Sea Urchin Immune System 2014
- A diverse immune gene family in the purple sea urchin. Is diversity driven by controlled genome instability? 2011
- Immune diversity in the purple sea urchin, Strongylocentrotus purpuratus 2011
- Highly Variable Immune-Response Genes (Sp185/333) from the Purple Sea Urchin 2010
- Diversity in the 185/333 gene family from the purple sea urchin. 2007
- Diversification of the innate immune system in the sea urchin 2007
- Diversity of the 185/333 gene system in the purple sea urchin 2006
- Unexpected diversity in a putative anti-microbial protein in a sea urchin 2004
- Immune Defenses Against Marine Microbes 2003
- A diverse array of genes are upregulated in sea urchin coelomocytes in response to lipopolysaccharide 2003
- Sea urchin coelomocytes respond to lipopolysaccharide with a diverse array of messages encoding a putative antimicrobial protein 2003
- A Genomics Approach to Understanding the Sea Urchin Immune System 2002
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conference poster
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report
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review
- Research Highlight: Invited Multitasking rSp0032 has anti-pathogen binding activities predicting flexible and effective immune responses in sea urchins mediated by the Sp185/333 system. Pathogens and Infectious Disease. 2016
- Bacterial and fungal pattern recognition receptors in homologous innate signaling pathways of insects and mammals. Frontiers in Microbiology. 2015
- Innate immune complexity in the purple sea urchin: diversity of the Sp185/333 system. Frontiers in Immunology. 2012
- Invertebrate Immune Diversity. Developmental and Comparative Immunology. 2011
- Diversification of innate immune genes: lessons from the purple sea urchin. Disease Models and Mechanisms. 2010